Back to PLS Help

permutation tests
jcrofts
Posted on 08/18/08 04:15:39
Number of posts: 29
j crofts
jcrofts posts:

Hi, my statistics is not very good and I am struggling to see exactly what the permutation test is doing. I realise that by reordering the rows we are testing whether the particular singular values are likely to be the result of chance. But what I don't understand is why we conclude that the number of times a particular singular value is exceeded is a good measure of this, and why being much smaller does not. It seems to me that either way the singular value could be markedly different. I'm sure this is down to my complete lack of understanding but some sort of explanation would really help me. Thanks, Jonathan

Replies:

Untitled Post
rmcintosh
Posted on 08/18/08 08:03:04
Number of posts: 394
rmcintosh replies:

A fair question.  The singular value is a squared quantity (actually square root of the eigenvalue) so lower values get you closer to zero but not below.  The singular value is also the covariance between the two matrices that you are analysing, so a low value indicates a weak (trivial) association. 

Now this does take us into the sticky issue of whether null hypothesis testing is really what we need to be doing - an argument that is bound to get a number of very heated responses.  This is why we also have the bootstrap which is a means of reliability assessment.



Login to reply to this topic.

  • Keep in touch

Enter your email above to receive electronic messages from Baycrest, including invitations to programs and events, newsletters, updates and other communications.
You can unsubscribe at any time.
Please refer to our Privacy Policy or contact us for more details.

  • Follow us on social
  • Facebook
  • Instagram
  • Linkedin
  • Pinterest
  • Twitter
  • YouTube

Contact Us:

3560 Bathurst Street
Toronto, Ontario
Canada M6A 2E1
Phone: (416) 785-2500

Baycrest is an academic health sciences centre fully affiliated with the University of Toronto